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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs6060985 chr20:30423968 A/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs6060990 chr20:30429987 C/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs6060995 chr20:30435985 C/T 0.000128 66 27.93 18.55 7.6 KM Plot
UVM rs60653548 chr12:132604145 C/T 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs60679870 chr12:9814044 TA/T 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs60927391 chr12:132626425 G/A 6.17E-5 65 31.83 22.87 0.4 KM Plot
UVM rs6120976 chr20:30233570 C/T 6.36E-5 67 27.92 8.25 7.6 KM Plot
UVM rs61914669 chr12:9577013 C/A 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs61914710 chr12:9594910 T/G 0.000142 66 27.62 23.63 7.6 KM Plot
UVM rs61914759 chr12:9604098 A/C 0.000142 66 27.62 23.63 7.6 KM Plot
UVM rs61915597 chr12:9611473 T/C 0.00012 67 27.37 23.63 7.6 KM Plot
UVM rs61916061 chr12:9763690 C/T 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs62019866 chr15:40853923 G/A 0.000214 67 27.88 24.87 16.78 KM Plot
UVM rs62019883 chr15:40880338 G/C 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs62019885 chr15:40886015 C/T 1.67E-5 66 27.23 24.87 17.07 KM Plot